2026
Compaction of Chromatin Domains Regulates Target Search Times of Proteins
S. Dutta, Adarshkrishnan R., R. Padinhateeri, M. K. Mitra
PLOS Computational Biology (accepted)
2026
Polymer Simulations of Chromatin: Connecting 3D Organization and Dynamics to Function
S. Dutta, R. Padinhateeri
Current Opinion in Genetics & Development (accepted)
2025
Predicting statistics of gene translocation events: role of chromatin compaction and double-strand DNA break
A. Jairam†, S. Dutta†, S. Kadam, K. Kumari, R. Padinhateeri
† equal contribution.
bioRxiv (under review)
2025
Organization principles of dynamic three-dimensional genome architecture associated with centromere clustering states
S. D. Polisetty, S. Dutta, R. N. Vadnala, D. Nontari, R. Padinhateeri, K. Sanyal
Proceedings of the National Academy of Sciences 122 (50), e2520310122
2025
The Role of Lamins in Genome Organisation: A Modelling Perspective
S. Dutta, M. K. Mitra
Lamins in Genome Organization and Diseases, Subcellular Biochemistry,
vol. 115, Springer, pp. 201–224
2025
Liquid–liquid phase separation of lamin drives altered chromatin organization in cardiomyopathic mutations of lamin A
S. Nath†, S. Dutta†, S. D. Sarkar†,
D. Sengupta, M. K. Mitra, K. Sengupta
† equal contribution.
Nucleic Acids Research 53 (14), gkaf615
2023
Predicting scale-dependent chromatin polymer properties from systematic coarse-graining
S. Kadam, K. Kumari, V. Manivannan, S. Dutta,
M. K. Mitra, R. Padinhateeri
Nature Communications 14 (1), 4108